Navegação por Autor "Urchueguía Schölzel, Javier Fermín"
Resultados 1-4 de 4
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Generation and evaluation of a genome-scale metabolic network model of synechococcus elongatus PCC7942
Triana Dopico, Julián; Montagud Aquino, Arnau; Siurana Paula, Maria; Fuente Herráiz, David; Urchueguía Fornes, Arantxa; Gamermann, Daniel; Torres Gavila, Francisco Javier; Tena Medialdea, José; Fernández de Córdoba Castellá, Pedro José; Urchueguía Schölzel, Javier Fermín (2014) [Artigo de periódico]The reconstruction of genome-scale metabolic models and their applications represent a great advantage of systems biology. Through their use as metabolic flux simulation models, production of industrially-interesting ... -
Large scale evaluation of differences between network-based and pairwise sequence-alignment-based methods of dendrogram reconstruction
Gamermann, Daniel; Montagud Aquino, Arnau; Conejero, J. Alberto; Fernández de Córdoba, Pedro; Urchueguía Schölzel, Javier Fermín (2019) [Artigo de periódico]Dendrograms are a way to represent relationships between organisms. Nowadays, these are inferred based on the comparison of genes or protein sequences by taking into account their differences and similarities. The genetic ... -
New approach for phylogenetic tree recovery based on genome-scale metabolic networkss
Gamermann, Daniel; Montagud Aquino, Arnau; Conejero Casares, Alberto; Urchueguía Schölzel, Javier Fermín; Fernández de Córdoba Castellá, Pedro José (2014) [Artigo de periódico]A wide range of applications and research has been done with genome-scale metabolic models. In this work, we describe an innovative methodology for comparing metabolic networks constructed from genome-scale metabolic models ... -
PyNetMet : python tools for efficient work with networks and metabolic models
Gamermann, Daniel; Montagud Aquino, Arnau; Infante, Ramon Jaime; Triana, Julian; Urchueguía Schölzel, Javier Fermín; Fernández de Córdoba Castellá, Pedro José (2014) [Artigo de periódico]The complexity of genome-scale metabolic models and networks associated to biological systems makes the use of computational tools an essential element in the field of systems biology. Here we present PyNetMet, a Python ...