• Generation and evaluation of a genome-scale metabolic network model of synechococcus elongatus PCC7942 

      Triana Dopico, Julián; Montagud Aquino, Arnau; Siurana Paula, Maria; Fuente Herráiz, David; Urchueguía Fornes, Arantxa; Gamermann, Daniel; Torres Gavila, Francisco Javier; Tena Medialdea, José; Fernández de Córdoba Castellá, Pedro José; Urchueguía Schölzel, Javier Fermín (2014) [Artigo de periódico]
      The reconstruction of genome-scale metabolic models and their applications represent a great advantage of systems biology. Through their use as metabolic flux simulation models, production of industrially-interesting ...
    • Multi-agent systems and machine learning facilitating genoma annotation 

      Bazzan, Ana Lucia Cetertich; Carvalho, Andre Carlos Ponce de Leon Ferreira de (2005) [Artigo de periódico]
      Multi-agent systems and Machine Learning techniques are being frequently used in genome projects. One of their uses is in the annotation process (annotation pipeline). Annotation employs a high number of programs and ...
    • Preferential duplication of intermodular hub genes : an evolutionary signature in eukaryotes genome networks 

      Ferreira, Ricardo Melo; Rybarczyk Filho, José Luiz; Dalmolin, Rodrigo Juliani Siqueira; Castro, Mauro Antônio Alves; Moreira, Jose Claudio Fonseca; Brunnet, Leonardo Gregory; Almeida, Rita Maria Cunha de (2013) [Artigo de periódico]
      Whole genome protein-protein association networks are not random and their topological properties stem from genome evolution mechanisms. In fact, more connected, but less clustered proteins are related to genes that, in ...
    • Viral DNA genomes in sera of farrowing sows with or without stillbirths 

      Tochetto, Caroline; Varela, Ana Paula Muterle; Lima, Diane Alves de; Loiko, Márcia Regina; Scheffer, Camila Mengue; Paim, Willian Pinto; Cerva, Cristine; Schmidt, Candice; Cibulski, Samuel Paulo; Ortiz, Lucía Cano; Callegari-Jacques, Sidia Maria; Franco, Ana Claudia; Mayer, Fabiana Quoos; Roehe, Paulo Michel (2020) [Artigo de periódico]
      A study was conducted to investigate the serum virome of sows with and without stillbirths after farrowing. Sera from sows with at least one stillbirth or with normal litters were collected immediately after farrowing. ...